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        If you use plots from MultiQC in a publication or presentation, please cite:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

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        About MultiQC

        This report was generated using MultiQC, version 1.21

        You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

        For more information about MultiQC, including other videos and extensive documentation, please visit http://multiqc.info

        You can report bugs, suggest improvements and find the source code for MultiQC on GitHub: https://github.com/MultiQC/MultiQC

        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

        Report generated on 2024-03-28, 12:46 EDT based on data in: /athena/cayuga_0019/scratch/mij4011/homework/project/alignments


        General Statistics

        Showing 40/40 rows and 2/2 columns.
        Sample Name% AlignedM Aligned
        SRR21190736
        92.8%
        28.9M
        SRR21190737
        92.1%
        29.5M
        SRR21190738
        89.6%
        27.9M
        SRR21190739
        88.0%
        26.2M
        SRR21190740
        89.3%
        30.1M
        SRR21190741
        86.1%
        31.8M
        SRR21190742
        90.9%
        25.9M
        SRR21190743
        92.5%
        27.7M
        SRR21190744
        91.1%
        26.3M
        SRR21190745
        91.1%
        27.2M
        SRR21190746
        93.2%
        34.2M
        SRR21190747
        94.5%
        30.0M
        SRR21190748
        93.2%
        30.8M
        SRR21190749
        94.0%
        31.3M
        SRR21190750
        94.0%
        32.9M
        SRR21190751
        94.8%
        30.2M
        SRR21190752
        94.0%
        25.8M
        SRR21190753
        94.2%
        33.4M
        SRR21190754
        91.8%
        32.3M
        SRR21190755
        91.6%
        32.5M
        SRR21190756
        94.2%
        30.2M
        SRR21190757
        94.7%
        20.7M
        SRR21190758
        94.1%
        27.2M
        SRR21190759
        94.5%
        24.9M
        SRR21190760
        95.1%
        28.9M
        SRR21190761
        95.6%
        25.7M
        SRR21190762
        94.2%
        23.4M
        SRR21190763
        94.1%
        24.0M
        SRR21190764
        95.2%
        31.7M
        SRR21190765
        94.7%
        31.8M
        SRR21190766
        95.4%
        34.2M
        SRR21190767
        95.9%
        31.5M
        SRR21190768
        95.8%
        32.2M
        SRR21190769
        95.9%
        31.6M
        SRR21190770
        95.1%
        25.8M
        SRR21190771
        95.8%
        28.0M
        SRR21190772
        96.0%
        27.5M
        SRR21190773
        96.0%
        25.0M
        SRR21190774
        96.1%
        30.5M
        SRR21190775
        96.2%
        31.9M

        STAR

        STAR is an ultrafast universal RNA-seq aligner.DOI: 10.1093/bioinformatics/bts635.

        Alignment Scores

        Created with MultiQC